33
Scheidler C, Sobotta J, Eisenreich W et al (2016) Unsaturated C3,5,7,9-monocarboxylic acids by
aqueous, one-pot carbon fixation: possible relevance for the origin of life. Sci Rep 6:27595.
https://doi.org/10.1038/srep27595 (PubMed PMID: 27283227; PubMed Central PMCID:
PMC4901337)
Zuker M, Stiegler P (1981) Optimal computer folding of large RNA sequences using thermody
namic and auxiliary information. Nucl Acid Res 9:133–148
Own RNA Analysis Examples Together with Method Protocols
Fiedler J, Breckwoldt K, Remmele CW et al (2015) Development of long noncoding RNA-based
strategies to modulate tissue vascularization. J Am Coll Cardiol 66(18):2005–2015. https://doi.
org/10.1016/j.jacc.2015.07.081
Fuchs M, Kreutzer FP, Kapsner LA et al (2020) Integrative bioinformatic analyses of global tran
scriptome data decipher novel molecular insights into cardiac anti-fibrotic therapies. Int J Mol
Sci 21(13):4727. https://doi.org/10.3390/ijms21134727
Kunz M, Xiao K, Liang C et al (2015) Bioinformatics of cardiovascular biology. J Mol Cell Cardiol
89(Pt A):3–10. https://doi.org/10.1016/j.yjmcc.2014.11.027
Kunz M, Wolf B, Schulze H et al (2016) Non-coding RNAs in lung cancer: contribution of bioinfor
matics analysis to the development of non-invasive diagnostic tools. Genes (Basel) 8(1):pii:E8.
https://doi.org/10.3390/genes8010008
Kunz M, Göttlich C, Walles T et al (2017) MicroRNA-21 versus microRNA-34: lung cancer promot
ing and inhibitory microRNAs analyzed in silico and in vitro and their clinical impact. Tumour
Biol 39(7). https://doi.org/10.1177/1010428317706430
Kunz M, Pittroff A, Dandekar T (2018) Systems biology analysis to understand regula
tory miRNA networks in lung cancer. Methods Mol Biol 1819:235–247. https://doi.
org/10.1007/978-1-4939-8618-7_11
Kunz M, Wolf B, Fuchs M et al (2020) A comprehensive method protocol for annotation and inte
grated functional understanding of lncRNAs. Brief Bioinform 21(4):1391–1396. https://doi.
org/10.1093/bib/bbz066
Stojanović SD, Fuchs M, Fiedler J et al (2020) Comprehensive bioinformatics identifies key microrna
players in ATG7-deficient lung fibroblasts. Int J Mol Sci 21(11):4126. https://doi.org/10.3390/
ijms21114126
Viereck J, Kumarswamy R, Foinquinos A et al (2016) Long noncoding RNA chast promotes cardiac
remodeling. Sci Transl Med 8(326):326ra22. https://doi.org/10.1126/scitranslmed.aaf1475
Literature